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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70981985, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSRQGSES SAATYHSQPE SENTQDSVGP ESPGSPPAPP GSPRSPEQQS QDGDNQEIPN  60
   61 IETTPKSGEN GEGSQKRQRV RFRSAISVDY PQPGGPESSE DERSIQEKQK AQRDQAQRQG 120
  121 QPHLMSTPYV HGSLDVTETP LKERTTQEDL QQAEKTPVDK KPDGIGAAAA VGDVSRTAKD 180
  181 KLRWLWDTVH GKLSKWSDRL GRPERGGDDL GPGVYHNEWT SGGNAPLGDL TDNKHKTHEE 240
  241 KKSHQATSTS EAHRLVRELT QDQSGNRRKT RGKPYPHTDT QGGQGGQGNN AIESGLRYRA 300
  301 GGGGVLAQLM KLNGGMQQGG QAGQAGQGGQ RSPSDTGTSG TTTPKKEKLK WYKNKQHTRS 360
  361 TSTLVGASGS MSGASTPVSS EVLSAASKRL GGQQFQQGGR MRLEDEIQVT VQIAEIIARQ 420
  421 RYIMQLCKAL MTFGAPTHRL EEYMQMTAKV LEVDSQYLYF PGCMIMSFDD PSTRTTEVKL 480
  481 VRVAQGINLQ KLANTHRIYK NVVHDVIGVE EAIQELEDIQ KKPPRFNKWI VVLVYGLASA 540
  541 TVGPFAFNAR PIDMPIIFFN GCLLGLMQQV FAPRSALYSN VFEVTAAVLT SFLARAFGSI 600
  601 PKAVIDGKRQ FLFCFSAIAQ SSIALILPGF LVLCSSLELQ SHQIIAGSIR MVYAIIYSLF 660
  661 LGYGITVGTT IYGLMDPSAV SDIQCPKAGA FKNPYLQRFP FVAIMTVWLL IINQGKWKQL 720
  721 PVMSTIAMSG YITNYFSTKR LGSNSQVANT VGAFTIGIMG NLYSRLWHGH AATAILPAIL 780
  781 VLVPSGLAAS GSLITGVASA DQIRHNISSP SGTSQPGAGL STNSSVWTLA VGMVQVAIGI 840
  841 TVGLFIAALV VYPYGKRRSG LFSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle