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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NTE1_ASPFU
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGVTQVDS TGLHSFSPSP SLSSSSSLPA VALSLAVSAS AVTASYSISH LPPPPLPPVP  60
   61 TTMAGWIGWV FSFFFQVIPS VLYWIITFST ITLPTWLFTL FSMSLTFTMN FTTLLLIVLA 120
  121 VVSTISWFIR YRFLNMYSRL PPEPQRKEPQ VDLFPDVQEG DSKPGLANYL DEFLSAIKVF 180
  181 GYLERPVFHE LTRTMQTRKL IAGETLMLEE EKGFCLVVDG LVQIFVKSMR DGKSDTDEEL 240
  241 HHLGAESSDE EHHIDGKQGY QLLTEVKNGA SMSSLFSILS LFTEDIQLRE NESSGSSSSS 300
  301 IALRAARVPN SIPTSPRGVM DSPSLGFQDH SDDTSNMITN GELPSVPPLH LGESRTPPSG 360
  361 DQHHQQHHES RKHSSRKRRK SVHPDIVARA MVDTTIAIIP ASAFRRLTRV YPRATAHIVQ 420
  421 VILTRLQRVT FATAHSYLGL SNEVLGIEKQ MTKFTTYDLP NNMRGAALDR LKDKFIKERD 480
  481 RLGSEEVTKG IALHNPSAGR RRRSSSFLRK DAALQAKLMT PRRAATVVTP ESAPAEHDTY 540
  541 GVSPGDLLST IQSSRFGPRY EQPPAKLQTP LAEKENTHFR LPAMQARHTF RRQDTMDEDG 600
  601 LFRECILDCI MKGIGLTSST RDALRKSNHS GEASPKLLSY DSRRQKAIFT NNAFGFIDPY 660
  661 EGSGDGETES LMSMSVTSAG GTSPVINLRE ELRNDIEIVY FPKGSVLVEQ GERHPGLYYV 720
  721 IDGFLDVGVP IVDKGEDLVG VSKPAASKGS FPTLKRTTTA NSVGAGGTAA NDSRRRKQSR 780
  781 KSLYLIKPGG IQGYVGAVAS YRSYTDVVAK TDVYVGFLPR ASLERIAERY PIALLTLAKR 840
  841 LTSILPRLLL HIDFALEWVQ VNAGQVIYRQ GDESDAIYLV LNGRLRSVLE SPGNKLAVVG 900
  901 EYGQGESVGE LEVMTESTRP ATLHAIRDTE LAKFPRSLFN SLAQEHPGIT IQVSKLIAQR 960
  961 MRDLVERPVT EKGVERSNAG SVQTATSTVN LRTVGILPVT AGVPVVEFGN RLLHALHQVG1020
 1021 VTNGVTSLNQ AAILNHLGRH AFSKMGKLKL SQYLADLEEK YGMVLYIADT NVSSPWTQTC1080
 1081 ITQADCILLV GLAESSPSIG EYERFLLGMK TTARKELVLL HAERYCPPGL TRRWLKNRVW1140
 1141 INGGHHHIQM AFRLTAEPTH PETKRFGTVL KQRVQVLQAE IQKYTSRRIR QTPLYSAQSP1200
 1201 FKGDFHRLAR RLCGRAVGLV LGGGGARGIA HVGVIKALEE AGIPVDIIGG TSIGSFIGAL1260
 1261 YARDADVVPM YGRAKKFAGR MGSMWRFALD LTYPTVSYTT GHEFNRGIFK TFGDSQIEDF1320
 1321 WLEFYCNTTN ISKSRPEYHS SGYVWRYVRA SMSLAGLIPP ICDEGSMLLD GGYIDNLTVD1380
 1381 HMKGLGADVI FAVDVGSIDD NTPQVYGDSL SGFWSVFNRW NPFSSCPNPP TLSEIQARLA1440
 1441 YVSSIDNLER AKNIPGCLYM RPPIDGYGTL EFGKFDEIYQ VGYAFGKQFL EKLKSEGSLP1500
 1501 LPEETEEKKK LQRTLAPRRA SI

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