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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|229091943, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRGGEMKQ FLLKSKSVLS NHFGFFLFAV ILFWLKTYAA YVTEFNLGIS NTIQKFLLFF  60
   61 NPLSSAVLFL GLALFAKGKR SYIWLIVINL LLSILLYANV VYYRFFSDFI TFPTLTQTNN 120
  121 FGDLGGSIVA LLHLYDPLYF LDTIILIVLV ATKFANPKPI RVAKYKVSLV FVAGILLFSV 180
  181 NLGLAESDRP ELLTRTFDRN YIVKYLGAYN YTIYDGIQSA KASTERALAD GDNMTEVRNY 240
  241 LTSTYASPNP EYFGKGKGMN VIYIHLESFQ NFLIDYKLNG QEVTPFLNSF TKDANTLYFD 300
  301 NFFHQTGQGK TSDAEFMLEN SMFGLPQGSV FTTKSHNTYQ SAPAILGQQG YTSAVFHGNY 360
  361 KTFWNRDDIY KSFGFNKFFD ASYYDMNEKD VVNYGLKDKP FFNESIPLLE TLKQPFYTKF 420
  421 ITLSNHFPYP IDKEEATIEP ANTGDSSVDT YFQTARYLDE SVKGFIDYLK QSGLYDNSII 480
  481 VMYGDHYGIS DNHNAAMSKV MGKEINSFEN AQLQRVPLIV RVPGVKGGVQ HQYGGEIDVL 540
  541 PTLLHLLGTD TKNYVQFGSD LLSPDHKQVV AFRNGNFVSP TVTALNGKYY DTTTGKPVEF 600
  601 TDEIKQNEQM VQNSLKYSDQ VVNGDLLRFY TPEGFTPIDR SKYNYNNRDK NKTKVKTAPE 660
  661 GEAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle