YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56526679
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNHRIVLFF FCFFFLIQKK SNQYNRDYSK INSIDTDEYE DKNKRKRDSY IKPDVGADTC  60
   61 VIFSAKEGDP HNCWCPRGYI MCSEEDVTDL QTKLEKIEDK NARTKLTPSW VKILCDDSKE 120
  121 YGFKNMSVVI DYELAVICKD MSNKENPDFE IIGASGYIPN ETVINEMKAD PTYVPRKCTV 180
  181 NNFYLCKQVE NDNVNCQYSP WSDWTPCIDN KQKRMKKVVR SNQNNTNFCL WNNKKIPRSI 240
  241 IEQTRSCE

Type	Start	End	Confidence
Signal Peptide	1	21	0.79
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	248	0.99