YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56522777
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTKHIIYLL FSFFFCHVAY GDKCAEPLTS LNFENFTLFH MLKVHDDKDE KLATWIHFFF  60
   61 NQFRGTDHAV GYMRQLNINI INQEDQACFI RAFNIYLLHK LSYHTKCVIN NGEKNYYEKR 120
  121 YDIIKQYCTD FIEVVNTPSL HKYFDTIITR KIGVEEIEED LGIIKGMIKK ATLEDPAKFT 180
  181 ADPMKALTAI KMVENVDDPS INPVKLAIRD YQLLAILSLK NHYYNSNVTS PILDVRRDID 240
  241 SKVRLWFRKR SKLFPLYLDS SMMFGSFQCH VNGKTYYETP DYFVHGFFSA IKEKMTKIYI 300
  301 RFLSNFNNAV EKKSYKIESL KGIRYLKSLF LRKTFPNFVR LHVDYMETEL SFLRETFLDM 360
  361 YDNTINCYAT KYANKAGANF IDSKMIPD

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	388	0.99