YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|152965042, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSRRPTAPR SPSRTGGAAG RSGAPRPGAG RGPGSPRRTT TGPATRPAPA ARGRSGATMS  60
   61 AADRRRTRGP RVLVLAVVAL LLAIFLLPSL QKWLEQRSEI GRLDAQISQQ REDLAAAQAQ 120
  121 EERWQDDAYV VAQARERLRY VKPGEVPYVV DGTTDADEVP PQQAATTVPK PSAAWYENVW 180
  181 ESLRLAGNPD ELAPSRTPGL GATSSSSSDT TP

Type	Start	End	Confidence
Cytoplasmic	1	68	0.99
Transmembrane Helix	69	90	0.88
Non-Cytoplasmic	91	212	0.99