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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69255787, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIHWAKGLG FGILLVLAGG LFAWNFFLSH PPRAKTAAQR AVAEIFAPIY REPRWDHVRT  60
   61 IGLQPKFTGC ETVDEHHYKT ALVPMAGPKL SLRERGGDLQ ALFADEAMIR RLFNHEVTSE 120
  121 KSAHTLIKIE HVQALLLGQC VEQKLFLKLV TTAHGDIVAT VEIALGDAAE AEQRAAEQAR 180
  181 VKEEEERLTR IRVKAQEAEQ RAAEQARVKE EEERLTRIRV KAQEAEQRAE QARVKEEEER 240
  241 LARIRVKAQE AEQRAAEQAR VKEEEERLIR IRVKAQEAEQ RAEQAREHAK DAAKIALGDA 300
  301 AKLANPSVQF NLGVMYDKGQ GVTKDAKEAV KWFRKSAEQG YAQAQHNLGV MYDKGEGVTK 360
  361 DAKEAVKWFR KSAEQGHAQA QHNLGVMYDK GQGVTKDAKE AVKWFRKSAE QGHAQAQHNL 420
  421 GVMYNNGEGV TKDAKEAVKW YRKAAEQGHA RAQNNLGVMY NNGEGVTKDA KEAVKWYRKA 480
  481 AEQGQAEAQN DLGVMYDKGE GVTKDAKEAV KWYRKAAEQG HARAQNNLGV MYNNGEGVTK 540
  541 DAKEAVKWYR KAAEQGQAEA QHNLGFMYDK GEGVTKDAKE AVKWYRKAAE QGQAKAQHNL 600
  601 GVMYNNGEGV TKDAKEAVKW FRKSAEQGEA KAQHNLGVMY NNGEGVTKDA KEAVKWFRKS 660
  661 AEQGEAEAQN NLGFMYDNGE GVTKDAKEAV KWLRKAAEQG HANAQAFLGQ SYDVGYGVTK 720
  721 DAKEAVKWYR KSAEQGQAEA QNNLGVMYDK GQGVTKDAKE AVKWYRKAAE QGDARAQFNL 780
  781 GDKYDKGEGV TKDAKEAVKW YRKAAEQGLT EASTRLKRLR FNVVGHENEG K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle