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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ABCD1_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTTNVKNNN NNINNTDEEI KIKNNYNQND ERLKKIKENK FDWALFKRFI NIIKILYAKP  60
   61 VIPLTLFLIL FGNGFAQTYV SKFTGILLAD IYASFTSGDK VFFLSSVLKA GFAIGGSALL 120
  121 AAIINFIVSI MAWNWRKTLC LYIQNVYFKK SLFYKILAFD DRIDNPDQRI TSDIDNFTTL 180
  181 LASIVSQCIT GPMVVVYYTY LCYTTIDWYA PLIVYGFFFL GYLINKLVMS PMVSINYLQD 240
  241 KLEGDFRSLH QRIRNFSESI ALYSLSKEKQ HPEKRFDNND YDHGYESDDS DQSCDESTTI 300
  301 INRKKNKGSQ YYKNKNSTSK KINDFIDKLS GDSNDQKEEL LVEEEQAKIQ FEALLKNKKR 360
  361 VIFWQLGLNT TSDLFTYLSP IANYFIIAIP VFFLNNKSVL QPGDVTVQSY NCIMLASGFS 420
  421 QYINVSQSIS DLSGYISRIS SMIEVCKKIM EDVSLDADIT KLNEKVAQTH NNDAIINTGS 480
  481 SGNISLNNGD SITLDDVTYF TPKGNQLYSK ISINVKRGNN LLIMGPSGSG KSSLIRIING 540
  541 LWPFFKGSID RPENGDMFFL PQQPYLIFGT LEEQILYPFS KKQKRIPKSI MRELFQRFEI 600
  601 DYLLDRERFI KKSAQVNDLT HNWLNQLSPG EQQLIAIIRL IYHKPKFALM DESTSSIPQS 660
  661 LEERVYYVAK ELGITIISVG HRISLLKYHS TLLRFDKDKN WYLEDIINQN NQSNNINNNN 720
  721 NNNTNKIAED SVFD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle