YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68195828, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKKSNKIAA LDTEYAKKKY AEFQQQQRQL IFRRRRLAAI FVGALVIFAI IGVQIFHDMQ  60
   61 RMHQLNELRV EANTEMKEVN ADVDQLHQDV SLLKDDEYVA KLARSKFFYS KDGEKVYPIL 120
  121 ESNTDSSTNE TDQSTSSTTA K

Type	Start	End	Confidence
Cytoplasmic	1	36	0.98
Transmembrane Helix	37	57	0.95
Non-Cytoplasmic	58	141	0.98