YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60467166
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRIKPFSRK LLIIYFYIIL IIIGFNILKY SLFDDDDANV FFYGSEDEVD IYSPEHQKYH  60
   61 HNIYNLDNDF QDQNNILAGE DDLPLEQVPD GVPSDLVYLK FLGSFDRPTD DNIARRCRGI 120
  121 DDKRWYYLIK KPMYPNQTVD MEIYNDSGIQ FQYPDREYNQ SIPRMIIALE PPHLRHCSFN 180
  181 QTCYKIFNFK VSYEAQSDIR TGFDTHKTSA FKTYNFIPAR DMVEIKNQFK KDYQIMKTTN 240
  241 LSALQPHQIP SLPLANWFCS NCQDVRSNRL EYVQELMKYI VIDSYGHCLN NMPTQEILKR 300
  301 LSNDPFAKKK EVITKYKFTI VFENSICKDY VSEKVLDALT AGSVPIFMGH PSTIKYLPYN 360
  361 SYIYVGDFNS TQELANHLIY LDQNDDEYNK ILLNWRTNET AIEQWKGVNN YPYKPGFIIR 420
  421 EFECAMLRHY QLLKSGVTPF KNLKYKPINE VCLPSNYFKI KLNKI

Type	Start	End	Confidence
Cytoplasmic	1	10	0.95
Transmembrane Helix	11	32	0.90
Non-Cytoplasmic	33	465	0.99