YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57472465
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKRGGSPL GNAPGSAEAQ QSAAKANLTN LTQQLTTEIE KAGENAAAFL KEQFGIDSVG  60
   61 QSMVWQLSSG NTATFNEVTL SHEQVRDETV VTFDVNGRDQ SLLTPESLSD LNSLEFQQFY 120
  121 PAVGREVDGK IDVLDGSRRR AWFLLQEGRV ESFRILVTQD DISVADAKAL AKQLQTAKEH 180
  181 NLREIGKQCL AIKASNEELT QAEIAKQVGL SQAGVSKAIK AASVDEKLVQ LFPVANALSH 240
  241 PDYTLLDKVM KVCQDNRQLS GFVNKIEKHI VNIQAEYDLQ DQKDAIVSAI KAELKIEEEK 300
  301 QDKDKAEVTP LAHFDSKGMF ARKRVKGRNF SYEFGRLSKE VQDELDKAIH SVLNKQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.65
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	356	0.99