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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ABCC7_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKKKIKNK ISYSLLEREL MGSRENEIAP EDCASFLSRI TYSWTQKMLI YGYFNTLQLK  60
   61 DVPDLPESIK VENTTPILDE FKFKKNEKFG LVWFIYKRFV MVRHKTSIIV QIFSAIVSVL 120
  121 SPLCLRAFIL YVQREPSEKS FLVGLFYAVL VLMGALFLSI SLQHTYWYTM KCGLEVKGAL 180
  181 TSKIYSKTLK LSNYGKRLYS SGTILNLISS DCQNFADYFW IDYLILLVAP IQIIALLALL 240
  241 CWTIGYSGLV GFLIMILSLP LSTFLSSKVS KYQLLSLKYS DKRCNLISEM INGIYLLKLY 300
  301 NWELFFINRI EKQRKQQLIN LYKRMAFWAL DKMVVQISSA LVLVSSFTVY TLIANKSITY 360
  361 EVAFTSISIF SNLREPCELL PQAIQRLLSL LPSSDRICKF LYETSEIIEN LSTITTTNGT 420
  421 NQDILITNGT FDWNDNNKNI NVGVDSQENK NDDDDMIELV NNDSIETTTS YVLDDINFIA 480
  481 PAGKLTIICG VVGSGKSSLI NGLIGEIYKV SGQVTIPNTV SFTNQQPFLV NSTLRENILF 540
  541 GLPMDMDRYK KVLESCSLLT DLQSMPGKDL TEIGERGINL SGGQKQRINL ARALYSNSDC 600
  601 YILDEPLSAV DPQVATHLFN HCIQGELMNN KTRILVTHQL QFIPSADHIV VLENGILTQG 660
  661 TYQELKDKFD FESIMKTKKL NLELNNSNNN NNNNNNKEEE EDVENLEKEQ QQQVINVNDV 720
  721 ISNEFESKND ELNSKLLVNE ERETGSVELN IYKMYIKYGS SFIFFFTMIM MYIISQLLFL 780
  781 LFDYWLTIWS DEKKNKNGTK GDSFYILYYL LLVGLFSVFL GIRYFMILHF TNSSSKNLHD 840
  841 KLLKSIGYAS CQFFDINSSG RINNRFTKDI AEVDLILMVL SDALYCGSTV LVAVLMMIVI 900
  901 NPLIVFPFLL LALFYYLVQK LYRSSSLELK RLENISRSPI FSILSESFNG LITIRSFRQQ 960
  961 SRFIKRMQDS INVNLRLFYY NFSAHRWIGI KIEIISSAAV FLSAFFSLFN SNTGLSVLAV1020
 1021 TTSLSLTGYL NWCIRQYIEF SMKMSSVERI ENYINQPREG DTMNVDMELE SNLPINWPQK1080
 1081 GEIQFKNVEI KYRPNLKPSL KNISFDIKSN EKIGIVGKSG SGKSTTMLAL FRMIECSKGS1140
 1141 IHIDGIDISK ISLSKLRNSI GICPQEPFIF SGTIRKNIDP FGIYSDSEIW LALEKVKLKE1200
 1201 TISLLPMKID TIIHEQANLS FGQKQLLCLT RVLLKSPKLV FFDEHSSSID YFTAHQLNIS1260
 1261 VKENITNSTT LTIAHRIDTI IDSDRILVID SGELIEIFDK NNINNNINNQ NSKFKKFVQH1320
 1321 TSDHFKNY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle