YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|242134350, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAVAFAVS AAPAAGIGTF LSLAGTQAAA AATSAVDNYA ATQYPIILVH GLTGTDKYAN  60
   61 VLEYWYGIRE DLQAHGAQVY VANLSGFQSD DGPNGRGEQL LAYVQQVLAA TGASKVNLIG 120
  121 HSQGGLTSRY VAAVAPQLVA SVTTIGTPHR GSEFADFVQT VLAYDPTGLS STVIAAFVNV 180
  181 FGILTSSTNN TNQDALAALK TLTTSQAATY NQNYPSAGLG APGSCQTGAQ TETVGGNTHL 240
  241 LYSWGGTAIQ PTLSILGVTG ATDTSTIPVV DPANVLDAST LAMLGSGTVM INRGSGANDG 300
  301 LVSRCSSLYG QVLGTSYKWN HLDEINQLLG VRGAYAEDPV AVIRTHANRL KTQGV

Type	Start	End	Confidence
Signal Peptide	1	30	0.97
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	355	0.99