YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85065585
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMVAALSTF AGGAIAQETG TLKKIKDTGV IALGHRESSI PFSYYDQNQQ VVGYSRDFQM  60
   61 KVVDAVKKKL NLPNLQVKNI PVTSQNRIPL VQNGTVDIEC GSTTNNLDRQ KQAAFSDTIF 120
  121 VIGTRLMTKK DSGIKDFADL KGKTVVTTAG TTSERLLREM NNKNQMGMSI ISAKDHGESF 180
  181 QTLETGRAVA FMMDDALLAG ERAKAKQPGE WVIVGKPQSQ EAYGCMMRKD DPAFKKVVDD 240
  241 AIVQVEKSGE AAKIYSKWFE NPIPPKGLNL NFPLSDEMKK LYANPNDKAL D

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	291	0.99