YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68076421
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLKKLLCFN LFLIIILTFE NLSFDKKNTC MINNTIRSNS CCIVNRVLRE KTHHYSSKIS  60
   61 KSIPFIQNFS LEKYFTGESL QKNILNNINK LGGAHLFHIS KSHLTAKSGN KNTEFIGEAT 120
  121 ELFKGFKRNF GINMTENKQT NIGRMLCEND NNNGGEDTST EKAIFKKSKD SQIHYRTDYK 180
  181 PSGFTIDNVT LNINIFDNET IVRSSLNMCT NENYADEDLV FDGVGLSIKE ISINNNKLTE 240
  241 GEDYTYDNEF LTIFAKNVPK ENFVFLSEVV IHPETNYALT GLYKSKDIIV SQCEATGFRR 300
  301 ITFFIDRPDM MAKYDVTLTA DKKKYPVLLS NGDKLNEFDI PGGRHGARFN DPHLKPCYLF 360
  361 AVVAGDLKHL SDNYVTKYTK KPVELYVYSE AKYVSKLKWA LECLKKAMKF DEDYFGLEYD 420
  421 LSRLNLVAVS DFNVGAMENK GLNIFNADSL LASKKTSIDF SFERILTVVG HEYFHNYTGN 480
  481 RVTLRDWFQL TLKEGLTVHR ENLFSEETTK TATFRLTHID LLRSVQFLED SSPLSHPIRP 540
  541 ESYISMENFY TNTVYDKGSE VMRMYQTILG DDYYKKGIDI YLKKHDGGTA TCEDFNDAMN 600
  601 EAYQMKKGNT DENLDQYLLW FSQSGTPHVT AEYIYDENEK TFTINLSQIT YPDDNQKEKY 660
  661 PLFIPVKVGF ISPKDGKDVI PETVLELKKD KESFVFQNVS EKPIPSLFRE FSAPVYIKDN 720
  721 LTDEERIALL KYDSDAFVRY NVCIDLYMKQ IIKNYNELIS QKTKENNVLE LSLTPVNDEF 780
  781 INAIKHLLED KHADPGFKSY IIALPRDRYI MNYIKEVDPI VLADTKDYIY KQIGSRLNPV 840
  841 LFSIFQNTES KANDMTHFKD ESYIDFDQLN MRKLRNSILM MLSKAQYPHM LKYIKEQSNS 900
  901 PYPSNWLASL SASSYFSGDD YYDLYDKTYK LSKNDELLLQ EWLKTVSRSD RSDIYSIIKK 960
  961 LEVEILKDSK NPNNIRAVYL PFTSNLRAFN DISGKGYKLM ANVIMKVDKF NPMVATQLCD1020
 1021 PFKLWNKLDL KRQALMHDEM NRMLNMENIS PNLKEYLLRL TNKM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle