YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56498955
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSDINGNIT NLENDSYRMI VLVLTFLCGF ILGLCFKCIS QIQKNASKVR DIYESISACD  60
   61 NDCKMVFCVR TDIKMNKGKI ASQCCHACLD VYEKILKRNR KLKANEHSKN VLTYYDIWKK 120
  121 NGQKKIVLKI SSLEEMYEIE KKAKMDGLIT SIIVDAGRTQ IEPNTETVIA IEPVPDEIVN 180
  181 KITGQLKLL

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.74
Transmembrane Helix	19	40	0.90
Cytoplasmic	41	189	0.76