YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56498333
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKMIILILFF FHLLFLNCVL SHKNIIQINY KINSYSANND NIQWNSIGAF VLDKNQIYNT  60
   61 SNVYINEKNK LIKKLKEQNF DYVLFQLCYK SVPQNCIQTY IDRKKIQNPE NFILLIGLDN 120
  121 NYMPYVLNYR TYDKVNDKNI KVFYDLFAIK VLSVSLPINI NKIQTDDNIN KNKYKGNENG 180
  181 KNKDEPKSFL RKYWIYIAIF LLSLSFSKHL TENTQQTGDS

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.57
Transmembrane Helix	5	26	0.54
Cytoplasmic	27	192	0.67
Transmembrane Helix	193	210	0.60
Non-Cytoplasmic	211	220	0.86