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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68070421
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLLLILLT KMFFCKIKRY MRTEYNYVTP FMKSKLFHNY KNKFNVIILK NIRNNVPNRN  60
   61 DKYLKCLSFP KKLDGGEQCD TKIEETHVKN EEKEASKRKN TNDDSAKTKK SKVKNENEIK 120
  121 KGSLFNCKVY EDEKISDLTS PKFNPANFDI SNLCLSEKDK IKHKFKDSLL FTFLTNTFNQ 180
  181 IEELKGSGAG SKKNVAIILS NVFRVLIYYS PNDLIPAVYI TLNKVAPDYQ NVEAGVGEAL 240
  241 ILKTMSEAYS RTETSIKKDL QQIEDLGIIA ESCSCKMRTI FPLPLTIQSV FNELKSIPNI 300
  301 SGSNSQQKKR EVIKKLLVSA KTSEAKYIVR FLQQRLRIGV NSATVLQALA YAFVLTRPEI 360
  361 PENIIKDGKM MNEKLLNEQT MVKGDKDNCN DGTTEVKNEN DIKLEKQNDT DNKTNMLDID 420
  421 QFNNLVKSIK IRNERMSKPN LFFNIGKEGD TRLLPIFKEL KNAYCDINND SDIFECMEKS 480
  481 VKSALCELPN IEMIIQNLLS GDDMNVLMKK CTVKTGVPVQ PMLAKPTKGI QEVLDRFNNV 540
  541 TFTCEYKYDG ERAQIHYIDK DNIKIFSRNL ETMTEKYPDV IQIVKDQIMP GVTESIIDSE 600
  601 VVAYDIENKK ILPFQILTTR KRKDVDIENI KVKICLFPFD LICCNGIPVI KEPLEIRRKL 660
  661 LYSLLKCKEG VLEYATHSEM NNIDDIDIFL QDAIENNCEG LMVKTLLDNA SYEPSRRSLN 720
  721 WLKVKKDYIE GLSDSVDLVP IAGYYGKGKR SGVYGAFVLA AYNSETENFQ TVCKAGTGFS 780
  781 DEILNALHES LSDKIIPNKK SYYEVSDKLN PDVWFDAHYV WEIKAADLSL SPVHTAAIGV 840
  841 YSDDKGIGLR FPRFLRLRDD KNPEQATTAQ QIVEFYEAQF ASKKNKNNNY NDESGSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle