YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56492690
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFFVSLFLC HVVYGDKCSI PLKDIKFQNF SLFNLIKSHD DTEGRLSTWI HFFFNRIHDP  60
   61 YYAGNYMKHF NINTINVEDQ PCFIRAFNIY MIHTHANKIL SVTENEENSF HKDKYSSIKD 120
  121 YLKDFFWVAE TKSVHKYLDD LLLNIHEIDN AKLDLSLIKD LVTKASVNTP AKFIDDPMKA 180
  181 LENIKLVEEV NDKRIDASKH ASRDYKLLAI LSLKNHYYNA DLTHPIPSVR DEIDSMIRLW 240
  241 FRKRSKLFPL YKNPLILEDN TRCSKTNLKC YPTPDDLVQA FFSAIKEKML KIYIRFLDNF 300
  301 SIAIQNKSYK IDGLKGMKFL KSLFQRKTFP NFVKLNSDYI SSELIFLRES FFDALDSTLN 360
  361 CYTNKYMNLP GDIYLDTKMV GA

Type	Start	End	Confidence
Signal Peptide	1	15	0.73
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	382	0.99