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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|63258971, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQISPPERI DFNTPAMVRK RRVRALKDRL THWYVAIGGL AVLAAITLIF FYLAYVVAPL  60
   61 FKGASLTAEP ALHAAWLQDA GAPLMITIEE QNQIGMRISD KGEVVFFNLE DGAELQRIAL 120
  121 PLPAGVSVAS IGKDQPGAPL IALGLSNGQV LVFRHSYLTT YPNDQKTITP SVAWPYGEAP 180
  181 LVLDEAGRAV EHVTVSSDGD SLKLAGSTGT QLHVVSLEQK ENVMTGEMTR EQTRIELPQM 240
  241 SAVVKAIYID PRQQWLYVIN GRAQADVFSL RDRSLNGRYK LLEDGNAEIT ASAQLVGGIS 300
  301 LIIGNSKGSL SQWFMARGTD GEQRLMRIRD FSLGSAPIAQ IKAEQRRKGF IALDTSGKLG 360
  361 VFHSTAHRTL LIDQVAEGPG ILALSPRANR ILIESAGKLL PLTLDNPHPE VSWSSLWGKV 420
  421 WYENYDEPKY IWQSTASNSD FEPKLSLAPL TYGTLKAAFY AMLLAAPLAV AAAIYTAYFM 480
  481 APGMRRKVKP VIELMEAMPT VILGFFAGLF LAPYLEGHLP GIFSVLLLTP IGILLAGFFW 540
  541 TRVPDSLRLR IPDGWESAIL IPVVLLVGWF SLSMSPHLES WFFAGDMSTW IRDHLGITYD 600
  601 QRNALVVGIA MGFAVIPNIY SIAEDAVFSV PRSLTLGSLA LGATPWQTLT RVVILTASPG 660
  661 IFSALMIGMG RAVGETMIVL MATGNTPIMD MNLFEGMRTL AANVAVEMPE SEVGGSHYRV 720
  721 LFLAALVLLM FTFVMNTLAE LIRQRLRKQY SSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle