YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UPPP_PSEU2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLWTAAQAL ILGVVEGLTE FLPISSTGHQ IIVADLIDFG GERAMAFNII IQLGAILAVV  60
   61 WEFRRKILDV VVGLPKQQQA QRFTLNLLIA FMPAVVLGVI FADTIHHYLF NAITVATALV 120
  121 IGGVIMLWAE RREHTVRTET VDDMSWSDAL KIGLVQCLAM IPGTSRSGST IIGGLLFGLS 180
  181 RKAATEFSFF LAMPTMVGAA VYSGYKYRDM FRPDDFAVFA IGFVTSFIFA MIAVRGLLKF 240
  241 IATHSYAVFA WYRIAFGLLI LATWQFGWID WASAKA

Type	Start	End	Confidence
Cytoplasmic	1	8	0.72
Transmembrane Helix	9	32	0.67
Non-Cytoplasmic	33	43	0.84
Transmembrane Helix	44	63	0.92
Cytoplasmic	64	82	0.95
Transmembrane Helix	83	102	0.96
Non-Cytoplasmic	103	108	0.77
Transmembrane Helix	109	129	0.94
Cytoplasmic	130	182	0.68
Transmembrane Helix	183	205	0.83
Non-Cytoplasmic	206	215	0.43
Transmembrane Helix	216	238	0.92
Cytoplasmic	239	248	0.41
Transmembrane Helix	249	269	0.92
Non-Cytoplasmic	270	276	0.44