YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63255922, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCALLTLAGL ARSTFYYQAQ VQSRPDPDAA LKQEIERIYH EERGLYGARR ITAVIRNSGT  60
   61 LVNKKVVERL MAELGLRSVV RPKKYRSYKG TVGKIAPNLL ERKFTAQRPN QKWVTDVTEF 120
  121 KVANRKLYLS PVMDLYNGEI VAYEVSTRPC FELVTNMLDK ALQQLQDEPK LVMHSDQGWQ 180
  181 YQHAQYRQKL AVKGVKQSMS RKGNCLDNAA MESFFGTLKS EFFYLKRFES IEELKAGLDE 240
  241 YIRYYNNDRI KLKLNGLSPV KYRAQAAS

Type	Start	End	Confidence
Signal Peptide	1	19	0.55
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	268	0.99