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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57238534, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVGENIKL TRRSFLKMAA LSSLATPLLA RSETLREASA DELKEAYEGS KKVKTVCTAC  60
   61 SVGCGIIAEV QKGVWVRQEI AQDHPVSSGG HCCKGSDMID MVRSHVRLKY PMKKENGEWK 120
  121 RISYEQALSE IGEKLAAYRK ENPESVMFLG SAKLNNEQAY YIRKFAAFFG TNNVDHQARI 180
  181 UHSATVAGVA NTFGYGAMTN HLGDIQRSKC IIIIGANPAV NHPVGFRHFL KAKEKGAKLI 240
  241 VVDPRFTKSA AKADIYARIR PGTDIAFMYG MLKIIFDEGL EDTKYLDERV FGIDKIREEA 300
  301 AKWTAEEVEN VTGISKELLV QITHEVAKNK PTTLIWAMGL TQHTVGTSNT RLAPIVQMVL 360
  361 GNIGKFGGGV NILRGHDNVQ GASDMACLSE NLPGYYPLNE ATWRYYAKIW GVDYEWLLGN 420
  421 FVSKDWMHKT GLSLARWWAA ALNGKDGNDA IDNAGTPLKA LVVMGNGITS TAQQVKVKEG 480
  481 LEALELLVLA DPFVNEAGII AERKDGIYLL PAATQFETSG SVTATNRSGQ WRFKVVDPLY 540
  541 ESMEDQEILF ELAKKLGFYE DFTKTLRDEK GEIVWPENAT REIAKAVRSI GLNGWSPERL 600
  601 KKHTLYWDKF DEVTLEGKDE VAGEYYGLPW PCWSDKHPGS PVLYNTDIEV AKGGMGFRNN 660
  661 FGLEYEGESL LAKNAPLNSP IDTGYPQITK DNIEKVLGIT LSAQEKEKMG STWSYDDSNI 720
  721 IATKCIEKGI VPYGNAKARA VVWTFKDKIP LHREPLHSPR NDLVQKYPSF EDQKALYRVD 780
  781 TKFVSVQQAK DYSKEFPLNL VTARLVNLNG AGMENRASMY LTRLTPEMFC EINPELAKEQ 840
  841 DIKAGDMIWV HSPEGTKIHV RVKVNPGVAK DMIFLPFHFT GVMQGVDLTH NFPEGTKPYA 900
  901 SGESANTVTN YGYDIMCQIP ETKGGLCRIS KDGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle