YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57235074, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNGMLIDTT RCTGCRGCQV ACKQWNENPA VKTTFSPEVT NPLEQNAFNY NLLECREIEE  60
   61 DGKLNWIFAH KRCLHCYEPA CVSVCPVGAL HKRPTGAVVW DQDKCFGCRY CQNACPFQIP 120
  121 KFEWDDNWAK ITKCTMCWNR VENGVEPACA ATCPTGAIKF GERADLLAEA YERLANDPDR 180
  181 YYPYVYGEKE AGGTHVLYLS SVEPEKIGFD MHENEFFPSF TREFLGNIPL EISIVASLMV 240
  241 GIWYFRGRRI QAQAHDAEHA ENKAGKH

Type	Start	End	Confidence
Non-Cytoplasmic	1	224	0.96
Transmembrane Helix	225	245	0.85
Cytoplasmic	246	267	0.84