YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57225505, gi|...
Protein type: Transmembrane
Type Confidence: 0.46
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSQFSRRDF LKISGGTAGL FATAGLFRGP IKGVEPTMVD TRPRWVKETT TICPFDASGC  60
   61 GFICYTDSAG NLTNMEGDPD NPVNRGSACS KGASLIQLHN NKHRLEKVLY RAAGASDWEE 120
  121 KSWDWALGEI ANKVKASRDS GFVATNAAGK TVNRTEAIAS LGGATLDNEE CYLLSKMLRA 180
  181 LGIVYLDSQA RLSTASSLEA LAASFGHHAM NNSWTDISNA NVILDMGGNP AENYPACFSH 240
  241 LGEAMGKGTE LISVDCRLTR TAAKAGTFVA ARSGSEIAFT GGLIKYVIAD IEAHPANYNL 300
  301 TYITEYTTAG MVVNSNFKGP ADLDGMFTGY NSASHSYDQS NWSFAKASNG DPIIDKTLTN 360
  361 PNCVFQLLKK QYARYTPEMV AATCGCSQAD FAKVCASFAS TGKADKAGAI IYAMSSTQHT 420
  421 SGAQTVRAYA ILQMLLGNIG VSGGGLFALG GESNVQGAAD NGVAWNKLPG YLSAPTEDDT 480
  481 NFAAFAAKSS EQNAASLLKA WYGSNASSSN GFGFSFLPKT DTNTDYSYVN AIKQMAAGTI 540
  541 KGAFAWGANP VVESAAAAQA TQALAKLDWL VVTDMFESET AAFWKKEGIS SQTEVFLLPA 600
  601 ACSYEKEGSV TNADRWVQWR NQAVNAPGEA KSELEVISSL FSRIQSLYQG ESALNAEAIT 660
  661 KLSWTYSTNP SAADVAKEMN GYKVSSLQQL ESPEELRTDG TVACGNNLYV GSFTDAGNQM 720
  721 ARREQTGVFH AGWAWSWPVN IRILNNRASV DLSGQPFNAA KPVVSWNGMG WSGDIVDGNN 780
  781 PPVNQSGGLP FKGTSGSQGQ LFAAMADGPM PEHYEPWESP VDNALSGTQN NPAAMVFEGD 840
  841 TKGSAGEYPV ICTTVRTVEH SLGGELTRNM PFLVELAPAA YVEISEQLAS EKGIKAGDIV 900
  901 KLTSARGSVS VAAAVTKRLK PFSIGGKTVH QVAIPYHWGF MGIAQGDSAN TLAPNTADSN 960
  961 SSTPEFKAFL VKVEKEADGT VPTITGRYKV LED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle