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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57225411, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNFHSTLSR RDFMKGIGLA GAGFGAAAAT APVFRDLDEG ASIAANTYKK NPWWVKERNY  60
   61 CDPTTPIDWD VWKAFDATHY DYIGGQYSEE YLAQIGVPSV LNESVAKRHE RITSRLGKPG 120
  121 FSMQDWAFCQ GAKNVTSSMC YNEFGQSRSM FLGDKKMMDE VMTPEQIGLS KYEGTPEYNA 180
  181 LMLKSAIRFL GGTDIRCLPV DDKTKRVLNV GENQHPDQPY VWEDGISWPY ETMTKRAIPT 240
  241 KDAHILVFSY NGSFDGTVRS PSWISNGVAF NQCLSGDSIQ LYLQRFLKGL GYWLVGGDDF 300
  301 PGIASYPGAG ALSGFGEIGR IGHAVGWDKW MRCTRLMVTN LPLPADNPID FGVVSFCTTA 360
  361 CKKCAEFCPV SAIKMDSEPS WELATDPSNP YLKPQNFNNP GRKTWYLNQA GCFSNWCLTD 420
  421 TFCGICMGEC VFNKLADSSI HEVVKPVIAN TTLLDGFFFN MDKAFGYGCL PEDQWEDWWT 480
  481 LGEKMPIHGI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle