YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57225268, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSHDTMKKV HDLLTFGFES QPRKFISWFI ISLICLNVLA VILGSVDTIA RDYHTLLHSF  60
   61 EIFSVTVFSL EYILRVWSCT VEPKYSHPFT GRIRFALSPL VLMDLLAILP FYLPFLIRVD 120
  121 LRFLRTLRLL RLFRLSHLKR FNETSHMILN VLRERREALI ISFSIILLLV IITSSLMYFV 180
  181 ENPAQPEVFK NIPDAMWWSV MTMTTVGYGD IYPITALGKF LGSVIAVLGL AVFALPTAIL 240
  241 SAGLLEEFRR KKELNEHICP VCGQEIPKH

Type	Start	End	Confidence
Cytoplasmic	1	24	0.79
Transmembrane Helix	25	46	0.92
Non-Cytoplasmic	47	94	0.56
Transmembrane Helix	95	117	0.87
Cytoplasmic	118	157	0.65
Transmembrane Helix	158	180	0.92
Non-Cytoplasmic	181	219	0.56
Transmembrane Helix	220	244	0.87
Cytoplasmic	245	269	0.74