YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RSMA_DEHM1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKDAPLAAT GTPSLMAQAK EMMEGYTLRA RKGLGQHFLI SQGVLNKILL AADLKPTDTV  60
   61 IEVGPGLGVL TEELIKRAGQ VIAVELDDKL VTALTEKFKA YPNFRIIHSD ILKTSPAEIL 120
  121 GQNIPYKLVA NLPYYITSAV LRQFLEAEAK PELMVVMVQK EVAKNMVAQT GDMGLLTLSV 180
  181 RFYGNPSLVS VVPGGAFYPP PEVDSAIVKV AIPQAAIMQG VSEADFFKLA RAGFGTRRKT 240
  241 LLNALAQGLG VSKQSVLALL NRAGIEPARR AETLSMEEWK MLCLVYTENP C

Type	Start	End	Confidence
Signal Peptide	1	19	0.64
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	291	0.99