YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AROE_DEHM1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTIPDALFG LIGFPVSHSV SPAMQNAAFK HCKLDYLYLT IAAKPEELQN VIASMGPLNI  60
   61 RGLNVTIPHK IEVIKYIDSL DPAAEKIGAV NTIVNENGRL KGYNTDFGGF VRLLEHNRIA 120
  121 PAKQRFTLLG AGGSAHAIAL AVCNLGGHLT VLARQEEKAK DLAGKMCLRL SGKTQGLELN 180
  181 DTNLEEALAD TDVIVNCTPV GMGNLAGQSL VPPRLLRPDL TVIDAIYNPC KTRLLEDAEK 240
  241 RGARIINGLE MLVWQGAMSF EIWTNQKAPF RLMMKEAELA LDENKK

Type	Start	End	Confidence
Signal Peptide	1	22	0.83
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	286	0.93