YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57225019, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFEIPKINY NGRIKEITLG EGPKAVTVGG ETSMPFYLFE GEMPRKPKIA MEIQDTPPED  60
   61 WPEDVLKPFG DAVNNPVSWA KKCVDTYGAE LICLQLESTD PNGLDRSAEE SAKIVREVAD 120
  121 AVDVPLIVWG TANHEKDTEV LRKASEACPD KKLILGPVEE GDYKKIAAQA MAYKHTIIAS 180
  181 SPIDINLAKQ LNILLGNLGV PAEGLIMDPT VSSIGYGIEY SYSVIERIRL AALTQQDERL 240
  241 QYPLICNIGR EAWKTKEAKI PEAESPEMGN TEKRAIMIEA MSAAILLIAG ADILVIRHPE 300
  301 SMRLAGELID ELS

Type	Start	End	Confidence
Non-Cytoplasmic	1	274	0.74
Transmembrane Helix	275	296	0.72
Cytoplasmic	297	313	0.51