YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57225015, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRVAEEWFA VCGGCELSLL DIGESLLDIL PNLEIVHMPV LMDHKLFGQK GDGTKPEIPE  60
   61 ADLGLITGGI RNEENKELAL EMRKKCKIIV ALGTCACFGG IPALANLSTT EAMLDQIFNK 120
  121 EKGTDPSSPP SDKSLPKLLD RVYAVDEVIK VDIHLPGCPP TPAHIVELLN AVLAGKTFAL 180
  181 PERSVCDTCP TIREKQSTGG SIKRPLQNAQ FTPGRYDNMR CLNEQGLFCL GPVTKAGCNR 240
  241 ILGADPSEEI PRCIKAYMPC RGCFGPVRQS SNPTADIMGS LSYIGRDPKE IVDRVATINR 300
  301 FIGSGRLRPQ DK

Type	Start	End	Confidence
Cytoplasmic	1	87	0.75
Transmembrane Helix	88	107	0.72
Non-Cytoplasmic	108	312	0.99