YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MIAA_DEHM1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRTDSTAKA TAPNPPLAPL LVILGNTGSG KSALALKLAR EIPAGIVNAD SRQIYSQMDI  60
   61 ATAKPTPAEM SEIPHYLYSF IQPDQPFSLA EYQSLAYQAI NKLHTQNRLP ILVGGSGQYL 120
  121 KAVLEGWSIP QIAPDETFRA AMFEKAEKEG GASIFAELVK QDPQAAAKID PRNIRRVVRA 180
  181 LEVINKTGAE FSKLQTKNPP PYRVLKIGIH LAREELYRTV DLRVGKMLEQ GLEAEVRHLL 240
  241 EQGYAATLPS MSGIGYRQIA KYIGGEISLS EAIEQMQFET HRLIRQQNTY FRLADPDIHW 300
  301 ITLEESMDSG IINLVRNFLA DGGKE

Type	Start	End	Confidence
Signal Peptide	1	35	0.88
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	325	0.99