YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57234406, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLVSIVMGS KSDAEVMKPT EEILEKMGIS FETLVMSAHR TPEKVQEFCL GASARGVELV  60
   61 IAAAGGAAHL PGVIASWLTL PVIGVPVASG ELKGVDALYS IVQMPAGIPV ATVAIGAAGA 120
  121 KNAAYLAAEI LGLKYQNIRQ AYESYRRELK GENK

Type	Start	End	Confidence
Cytoplasmic	1	58	0.87
Transmembrane Helix	59	80	0.77
Non-Cytoplasmic	81	100	0.78
Transmembrane Helix	101	125	0.68
Cytoplasmic	126	154	0.82