YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57234381, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTLGFIGAG TVGSALAVGL TGKGYPVSGI ASRTAQSANR LCRKIPSVQI CLNPQEVADT  60
   61 ADIVFITTPD DTIAEVCRSI SWHPGQYIIH CSGAYSAELL QTAHEFGAHT GVLHPLQSFS 120
  121 LQTDPVKNLR GITYALEGDD QTLPVLKDMV KVLGGEWIIL KPSDKLSYHL AAVMASNYLV 180
  181 TLMEMAAGLW QTFGVPEDKA VKALMPLVRG TLSNIEKAGI TSALSGPIAR GDYGTVLKHL 240
  241 ANLENTAPEL LPVYKELGSQ TVKIALDKEN PNLAGIEKVS EILAN

Type	Start	End	Confidence
Signal Peptide	1	17	0.88
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	285	0.96