YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57234307, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTDYGYIAL FLVAAILFTA IVLGLPVLLR IIGIVPNKPD KVKNATYECG VETQGRTWVQ  60
   61 FNFRYYYYAL LLIAFDVLLV FLFPWATQIG SLGFYAFGIV LAFLIIVMVG YLYAWKKGAL 120
  121 EWN

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.91
Transmembrane Helix	7	29	0.93
Cytoplasmic	30	64	0.90
Transmembrane Helix	65	86	0.94
Non-Cytoplasmic	87	92	0.80
Transmembrane Helix	93	115	0.94
Cytoplasmic	116	123	0.94