YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NUOB_DEHM1
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELDSGKPLS LLTLDEIDQH EGGIIQSFRT GHTTPYPDPA DWLNSEEPPP GVFVTSVEKV  60
   61 LNWSRHYSLW PVMFGLACCA IEMMCMAASR WDLARFGMDI FRASPRQADL MIVAGTLTWK 120
  121 MAPWLKRIYD QMPEPKWVLA MGACGTSGGL FRDSYSVVPG FNMVVPVDVY VPGCPPRPEA 180
  181 LLRAIMDIHE KIDKTRIIKR

Type	Start	End	Confidence
Cytoplasmic	1	68	0.64
Transmembrane Helix	69	91	0.82
Non-Cytoplasmic	92	107	0.62
Transmembrane Helix	108	122	0.47
Cytoplasmic	123	200	0.52