YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NUOH_DEHM1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.87
Transmembrane Helix	8	29	0.96
Cytoplasmic	30	75	0.97
Transmembrane Helix	76	98	0.91
Non-Cytoplasmic	99	107	0.87
Transmembrane Helix	108	129	0.94
Cytoplasmic	130	147	0.92
Transmembrane Helix	148	169	0.88
Non-Cytoplasmic	170	177	0.72
Transmembrane Helix	178	196	0.88
Cytoplasmic	197	228	0.90
Transmembrane Helix	229	251	0.86
Non-Cytoplasmic	252	260	0.70
Transmembrane Helix	261	281	0.91
Cytoplasmic	282	292	0.91
Transmembrane Helix	293	315	0.91
Non-Cytoplasmic	316	321	0.83
Transmembrane Helix	322	343	0.92
Cytoplasmic	344	353	0.95

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDFWVHLLV YLVILFGFVI VSVLLFIWLE RRFIGRFQLR PGPNRAGPFG LLQPIADAIK  60
   61 VLIKEDIIPT ESDKGVFWLA PLVAFVPVML MFAAIPFADG AMLVDLNIGI LYILAVSSVT 120
  121 VIGIFMAGWS SNSKYSLLGA MRTIAQEVSY EIPLVLSILG VVMLTGSLSM NEIVKAQSVP 180
  181 FVLLQPLGFF VYLSAAMAEI NRTPFDLLEA ESEIIAGFHT EYSGMKFGLF YLMEYAEVLA 240
  241 ISAIATTLFL GGWQGPLLHP VIWFITKVLI IFMFIIWVRA TIPRLRIDQV MAFGWKFLLP 300
  301 LSLANLVITA FEILAAPDMN TAVLIGINIA VMFGLILLFS RFYKLGGGRV SVK