YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57234301, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIAFWIIAI TCIASALLVV GVKNIFHSSL WLILCFLSVA GVFLLLSADF LAAVQILIYI  60
   61 GAISVLIILA IMLTREVQRG NLTNKLKIPA LAVVTALGGI MTYMLISSNW TSSDAPAPST 120
  121 TTAGLAEMLF GSDGFGLGVL ITGVILLVAI IGAIVLVRDK

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.82
Transmembrane Helix	5	22	0.92
Cytoplasmic	23	29	0.69
Transmembrane Helix	30	48	0.92
Non-Cytoplasmic	49	55	0.63
Transmembrane Helix	56	74	0.96
Cytoplasmic	75	85	0.88
Transmembrane Helix	86	107	0.90
Non-Cytoplasmic	108	134	0.93
Transmembrane Helix	135	157	0.94
Cytoplasmic	158	160	0.92