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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57234243, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEKNLPDTL PKIIMGISGM SCTRCAASIE ARLSKTDGIT DPKLNFASAK LIFSYDPAVI  60
   61 SLADIKSIIS GLGYGVISRK SIFPIKGLHC ASCVARAEKA LKNTNGVLSA SVNLANQTAN 120
  121 VEYLDFISYR ELSQAIKNTG YELLSEETPQ NELNSSENAE TRKLQQELTV ALVLGISLMI 180
  181 IGFLPAFGGK EFIMFLLATP VQFWAGLRFY RGAFAALKNR TSDMNTLIAL GTSAAYLYSL 240
  241 TALVFPSIFD SPLLEKHLYF DTSAMIIALI LTGRFLEARA KGRTSDAIRR LVGLQPSTAS 300
  301 IIRDGKEILV GISEVVAGDK IVIRPGERLP VDGLILEGYS SLDESMVTGE SIPAEKKAGD 360
  361 YVIGGTFNQT GAFTYEAQKV GADTALARII RLVEEAQGSK APIQRLADKI ASVFVPAVIS 420
  421 IAILTFVFWL VFGPEPSFTY AALNMIAVLV IACPCALGLA TPTALIVGMG KGAENGILIR 480
  481 SAVALEKMHK LDTIVLDKTG TLTRGKPVLS NLVSHTMDKD SFLTLVASAE QFSEHPLAKA 540
  541 VVKEAARKKL KITSSSEFSA LPGAGLKATV SGKQILIGNA NLMQSNRISL AEYQSEADKL 600
  601 WEAGENLIFV AADGKLEGMV AVRDILKRES QAVVAELKAN KLRTIMLTGD NQRAAKRIAD 660
  661 ELGLDQYISE VKPEDKSRLV QELQDQGHFV AMVGDGINDA PALAKADVGI AIGTGTDIAM 720
  721 ETGDITLISG DLFGLTKAIV LSKATFNTIR QNLFWAFFYN IILIPVAAGV LYLFLSHSGV 780
  781 PQSLHFFLGE YGFLNPILAA LAMAVSSLTV VSNSLRLRRV KLNTYLKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle