YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57234190, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEFWNSIQL AFAAVGGWLG YFLGGCDGLL IALIIFAVCD YITGVMCAIV DKKLSSEVGF  60
   61 KGICRKVLIF VLVGIGNVVD VQVLGQPGVL RTAIIFFYLS NEGLSLTENS AHLGLPIPEK 120
  121 LKAVLEQLHD RDSEEEHKHD E

Type	Start	End	Confidence
Cytoplasmic	1	6	0.62
Transmembrane Helix	7	24	0.75
Non-Cytoplasmic	25	28	0.60
Transmembrane Helix	29	50	0.84
Cytoplasmic	51	66	0.78
Transmembrane Helix	67	84	0.72
Non-Cytoplasmic	85	141	0.65