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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57234174, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRIKGITV EIGGDTTGLS KALSDVNKEI KNTQSQLKDV NKLLKLDPTN TTLLEQKQKL  60
   61 LKQAVSETKD KLTQLKSVQD QMDAGLKNGT VTQQQYDAWQ REIIETENEL RNLEQQCRET 120
  121 DSHISATLKQ TGSKLQEVGG KISSVGTGLT THVTAPIMAI GAASLAAFNE VDAGLDIVAQ 180
  181 KTGATGKALE DMNQIVKDLA TEIPTDFETA GAAVGEVNTR FGLTGQALDD LSAKFIKFAQ 240
  241 LNDTDVSTSI DNVSSVMNAF GMDASEADSL LDALNATGQA TGIDMDTLAG ALSSNAIQLK 300
  301 EMGLTAQQAA GFMGMVEMSG LDTSSAMMGL KTAMKNATKD GKTLDQALAD FSQTMKGNGS 360
  361 ETEKLQAAYD LFGSKAGASI YNAVQTGKLS LDDLAGSLGD FEGSVENTFN ETLDPIDQFK 420
  421 MTMNSLKETG AEIGNTLATV LAPVLKDISA ALKAFAEMWS KIPAPVQQTI VKIALVAAAI 480
  481 GPILVVVGKI ISAVGTIMTI IPQVSAAIGV VKGAMAALNA TMLANPIVLI IAAIAALVAA 540
  541 FIYLWNTNEG FRQFWIDLWE NIKQAVVTAW EAIKSFFSTV WETIKGIFEA AVNGISTFLT 600
  601 NAWMAITTTV QTVFNAIKTF FETIWNAIKT VFETVFNVIK TIVTTYFNIY KTIIETVLNV 660
  661 IKAVVTTVWN AIKTVVTTVV TAIQTFITTA WNAIKTAVTT VMNAIKTVVS TVWNGIKTTI 720
  721 MTVVNTVKNG ITTAFNAIKN TISNVLNGIK NTVSNVFNGI WNFISGIVNK LKNVFNFHWE 780
  781 LPKIKLPHFS ISGSFSLNPP SIPHFSVEWY KKAMGNGMIL DSPTIFGMSG NTLLGAGEAG 840
  841 AEAIVGVDSL RGMIQDAVAG QTSAIVTALA GVGGGGDITI PVYLGGTLLD ETIVTAQQRM 900
  901 ALRSGGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle