YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57224565, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRMVNRILP RFVAVFAVMG VLVFSGCSPA EENHVAVEIS ISAAASMTDA LQEINALYMQ  60
   61 ENSWVTLSVN FASSGTLQKQ IENGAPVDVF ISAAPAQMNA LEEGGFLVDS SRRNLLNNKI 120
  121 VLIVPSDSTL GLDSFMDLLD SGVVRIALGD PEFVPAGTYG KKALEILGIY DQLLPKLILG 180
  181 SDVRQVLGYV EGANVEAGIV YSTDAAITDG VVIVAEAPAE VNTLIVYPAA IIKGCQDIEA 240
  241 AQAYIDFLFG QEAAAIFAEY GFSLAEG

Type	Start	End	Confidence
Signal Peptide	1	29	0.98
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	267	0.99