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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57224548, gi|...
Protein type: Transmembrane
Type Confidence: 0.55
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVNRRDFL KAAGVGAAGL GVAAAGSYWN SYHEGQSAFS MQGQEHRQGH EYFNREPFRV  60
   61 DKVTPFSWEV IGPDLPNNHS VGGIHRIDMR WYYGERFKSA GHAVSGSSPA LGYDLTKGDL 120
  121 DAMPNTWPSN GLAGLSTFYQ EYYDLYPMMV DIDKEYKYDW LPQLVERFQA SIESRANFNA 180
  181 NEGLIAMARS EAQRAVPVSS ITAPPEENDW SGVSARRAVF DSPELASQLV KRMAADLGAT 240
  241 FVGVTPLNKG WVAYSHAPLG GLGGGTGGRG FGINTPIKIP DWWDNAILVT GTMSWDVNAG 300
  301 DPNYGDSWTG YNISSQIAQQ MVKFLKYLGY PARWHSPFGG YDFPVPGIAA ECGMGEIGRT 360
  361 SNCLAPDFGG NVRPAVITTS LPLAADKPVD FNLAEFCSRC KLCAQVCPTQ AISYDDKPKF 420
  421 EIYGQRRFNT NLAKCRDGWN LGAGPMGCRA CISVCPWTKK NTWVHRFVRE VLSHDATGTS 480
  481 QNIAIWAERT LYPKHYQEEL NPPNYQGVYE PPKWIQTNEY VSSFVNTPMG VK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle