YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57224515, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYMSQALSL AKLAIGQVSP NPAVGAVIVK NGEVVGQGFT QPPGGDHAEI VALKQAAEKA  60
   61 KGAALYVTLE PCCHQGRTPP CTVAIIESGI KEVYIATLDD NPLVSGKGKK ELEDAGIKVH 120
  121 LGMMEREARQ MNEAYFKYIT TGMPFVTAKY AMSLDGKTGT RTGDSKWISN EESRHFAHYI 180
  181 RHISDVIMAG LNTILKDDPH LTARVNCGRG GTSHCQPTRV IIDDNGRAPL SSNVFHVPGN 240
  241 TIVAVAKGLT PEEKQAYDEV GAKVVEMPDE RGLVDLKSLL RYLGQNGVTS VLVEGGGIVL 300
  301 GSLFDLKLVD KVLVFVAPII IGGKDAKIPV AGLGAELITD SAKLRDITTT AFGQDVLISG 360
  361 YVIKE

Type	Start	End	Confidence
Signal Peptide	1	25	0.82
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	365	0.99