YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57233999, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVVAFNGSP RAQGNTRRGL EMVLAELEKE GIQTEIVQLG GKRVFGCLAC GQCKINKNLR  60
   61 CARNDDDMNA FIAKMFEADG IIIGSPTYFS NVNAEVKALI DRAGMVARAN DHALKGKVGA 120
  121 PLVAARRAGA TFVYSAINFF FGINQMIVPG SIYWNMTLGG APGDIEKDEE GKNTFIQLGK 180
  181 NMADLLKKLN

Type	Start	End	Confidence
Cytoplasmic	1	129	0.69
Transmembrane Helix	130	148	0.64
Non-Cytoplasmic	149	190	0.93