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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57224224, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAPKQTKRF AFAISGIVQG VGFRPFVYQL AAKHGLNGWV RNTSAGVEIE AEGIEQALDS  60
   61 FSDELISLSP PQSVIKTFKQ TEIPLTGEEG FTIKPSQSLS GRFQLVSPDI ATCTQCQNDV 120
  121 SDPRNRRYRY PFTNCTNCGP RFTIIEDIPY DRPLTTMKDF EMCPVCQAEY DNPLDRRFHA 180
  181 QPNACPVCGP RLWLVDKTGK ELESADAIAE AAKLLKDGRI LAIRGLGGFL LAADATNQLA 240
  241 VNTLRRRKHR PSKPFAVMLP DIAEARKHCF ISAEEEKLLI SPAAPIVLCK WNRESPICPE 300
  301 TAPKQNYLGI MLAYTPLHHL LLKETGKPLI MTSGNLSAEP IAKDNDEALK RLGNIADYFL 360
  361 LHNRPIYSRY DDSVVMYEAG AKRVIRRGRG YAPYPVQTSF TDKEVLALGP QEKNTFCLLK 420
  421 DGYAFVSQHI GDMQNPETLD SFEETLAVYL KLFRLNPQII ASDLHPGYIT TALAEARSAS 480
  481 LDIPLVKVQH HHAHIASCLA ENNCDEEVIG VALDGTGYGL DGHIWGGEFF CGGIKQGFSR 540
  541 QAHLEYLPLP GGEAAIKKPY RTAVSYVYTL LGEEGLNFFK NIEPEELDII KTQLERKLNS 600
  601 PLTSSAGRLF DAVAALCGIC QVANYDSQPA IELETEAGDT EFAQCYPFEL DLDKGIYLIR 660
  661 LKGIIQGVLS DLSSGKTAAY ISVKFHNTVS QIVLDTCLRL SARSGLTKVA LSGGVFQNRR 720
  721 VFRQVIKKLE AEGFEVITHK EIPSNDGCIS LGQAVIATSQ GGI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle