YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56680321, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRTTNTRK KKARKADTKL RPGRWVLRWV SRAFAAGFAA LLVLVLLFSM INPPITHTIW  60
   61 SEYSRLGKVE RDWVPLEEIA PVMARSVVAA EDANFCLHWG FDVNAIRAAI DEGSGRGAST 120
  121 LSQQVVKNVY LWQGRSWIRK ALETAITPLV ELTWSKRRIV EVYLNVAEMD EGVFGVAAAA 180
  181 DRYFGVSPDK LSAQQAARIA AVLPNPRGRS ASDPSPRLRK RAAAIMDGAA TIAADGRSDC 240
  241 FE

Type	Start	End	Confidence
Signal Peptide	1	58	0.88
N-region	1	49
H-region	50	55
C-region	56	58
Cleavage Site	58	59
Non-Cytoplasmic	59	242	0.99