YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|222423704, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLSNAFSV LAFADEDAPM ASSSSTESVN GSLEDGDYKQ PLVWIDLEMT GLNVEVDRIL  60
   61 EIACIITNGD LTQSVEGPDL VVRQTKDCLD KMDDWCQTHH GASGLTKKVL LSAITEREAE 120
  121 QKVIEFVKKH VGSGNPLLAG NSVYVDFLFL KKYMPELAAL FPHILVDVSS VKALCARWFP 180
  181 IERRKAPAKK NNHRAMDDIR ESIKELKYYK KTIFKARR

Type	Start	End	Confidence
Signal Peptide	1	14	0.65
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	218	0.96