YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|79324885
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNLCALGRT VEEIMDPAEM RYLEEEDGPL MKTIKGSITG FGAGTIYGTI LATWKDVPRV  60
   61 ERNVALPGLI RTLKMMGTHG LTFAAIGGVY IGVEQLVQNF RSKRDFYNGA IGGFVAGASV 120
  121 LGYRARSIPT AIAAGATLAV TSALIDSGGQ TTRVDNGREY YPYTVEKRAE ADS

Type	Start	End	Confidence
Cytoplasmic	1	74	0.56
Transmembrane Helix	75	93	0.88
Non-Cytoplasmic	94	105	0.51
Transmembrane Helix	106	125	0.70
Cytoplasmic	126	173	0.52