YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NAC68_ARATH
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKGLIGYRF SPTGEEVINH YLKNKLLGKY WLVDEAISEI NILSHKPSKD LPKLARIQSE  60
   61 DLEWYFFSPI EYTNPNKMKM KRTTGSGFWK PTGVDREIRD KRGNGVVIGI KKTLVYHEGK 120
  121 SPHGVRTPWV MHEYHITCLP HHKRKYVVCQ VKYKGEAAEI SYEPSPSLVS DSHTVIAITG 180
  181 EPEPELQVEQ PGKENLLGMS VDDLIEPMNQ QEEPQGPHLA PNDDEFIRGL RHVDRGTVEY 240
  241 LFANEENMDG LSMNDLRIPM IVQQEDLSEW EGFNADTFFS DNNNNYNLNV HHQLTPYGDG 300
  301 YLNAFSGYNE GNPPDHELVM QENRNDHMPR KPVTGTIDYS SDSGSDAGSI STTSYQGTSS 360
  361 PNISVGSSSR HLSSCSSTDS CKDLQTCTDP SIISREIREL TQEVKQEIPR AVDAPMNNES 420
  421 SLVKTEKKGL FIVEDAMERN RKKPRFIYLM KMIIGNIISV LLPVKRLIPV KKL

Type	Start	End	Confidence
Non-Cytoplasmic	1	446	0.84
Transmembrane Helix	447	468	0.53
Cytoplasmic	469	473	0.40